dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02539
Location and strand information: 1218 - 7871 (+)
Family: CBM32|CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6935
Protein molecular weight: 243824.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02540
Location and strand information: 7893 - 13550 (+)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9249
Protein molecular weight: 208010.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02541
Location and strand information: 13704 - 19934 (+)
Family: CBM32|CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.813
Protein molecular weight: 228022.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02542
Location and strand information: 20031 - 27065 (+)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6386
Protein molecular weight: 259162.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02543
Location and strand information: 27186 - 28985 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02544
Location and strand information: 29209 - 31047 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02545
Location and strand information: 31044 - 32594 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02546
Location and strand information: 32677 - 34128 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02547
Location and strand information: 34589 - 36091 (+)
Family: 3.A.1.2.20
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02548
Location and strand information: 36113 - 37114 (+)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02549
Location and strand information: 37117 - 38130 (+)
Family: 3.A.1.2.1
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrD

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02550
Location and strand information: 38210 - 39391 (+)
Family: 3.A.1.2.9
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02551
Location and strand information: 39619 - 39930 (+)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02552
Location and strand information: 40139 - 41350 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02553
Location and strand information: 41531 - 42796 (-)
Family: 3.A.1.2.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02554
Location and strand information: 42796 - 43800 (-)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000000287_35|CGC1
Gene ID: MGYG000000287_02555
Location and strand information: 43804 - 45312 (-)
Family: 3.A.1.2.20
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000287_02539
MGYG000000287_02540	GH78_e47\|CBM67_e0\|3.2.1.40\|3.1.1.73	alpha-rhamnoside
MGYG000000287_02541	GH78_e15\|CBM67_e7\|CBM32_e58\|3.2.1.40	alpha-rhamnoside
MGYG000000287_02542	GH78_e47\|CBM67_e0\|3.2.1.40\|3.1.1.73	alpha-rhamnoside

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is alpha-rhamnoside

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000287_02539	hypothetical protein	CAZyme	1218	7871	+	CBM32\| CBM67\| GH78
MGYG000000287_02540	hypothetical protein	CAZyme	7893	13550	+	CBM67\| GH78
MGYG000000287_02541	hypothetical protein	CAZyme	13704	19934	+	CBM32\| CBM67\| GH78
MGYG000000287_02542	hypothetical protein	CAZyme	20031	27065	+	CBM67\| GH78
MGYG000000287_02543	hypothetical protein	null	27186	28985	+	NLPC_P60
MGYG000000287_02544	hypothetical protein	TC	29209	31047	-	8.A.59.2.1
MGYG000000287_02545	HTH-type transcriptional activator RhaR	TF	31044	32594	-	HTH_AraC+HTH_AraC
MGYG000000287_02546	Chemotaxis response regulator protein-glutamate methylesterase	TF	32677	34128	-	HTH_AraC
MGYG000000287_02547	Ribose import ATP-binding protein RbsA	TC	34589	36091	+	3.A.1.2.20
MGYG000000287_02548	Ribose import permease protein RbsC	TC	36113	37114	+	3.A.1.2.9
MGYG000000287_02549	Autoinducer 2 import system permease protein LsrD	TC	37117	38130	+	3.A.1.2.1
MGYG000000287_02550	hypothetical protein	TC	38210	39391	+	3.A.1.2.9
MGYG000000287_02551	L-rhamnose mutarotase	null	39619	39930	+	rhaM
MGYG000000287_02552	hypothetical protein	null	40139	41350	-	Peripla_BP_4
MGYG000000287_02553	hypothetical protein	TC	41531	42796	-	3.A.1.2.8
MGYG000000287_02554	Ribose import permease protein RbsC	TC	42796	43800	-	3.A.1.2.9
MGYG000000287_02555	Ribose import ATP-binding protein RbsA	TC	43804	45312	-	3.A.1.2.20
Protein ID	Protein Name	Type	Start	End	Strand	Signature